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Professional networking for Bioinformatics Linux Support resource
by Kathleen McTeague July 28, 2010

July 28, 2010

Greetings, I'm reaching out to do some professional networking to see if I can send out a unique job posting to the Worcester Linux User Group. We are looking for a seasoned Linux Admin for a unique role to work for the vaccine division of a local pharmaceutical company based here in Cambridge, MA. This position is a long-term contract approved through the end of this year with the likelihood of extending long-term, possibly perm. The role will have 'one foot' in IS, and the other in the Bioinformatics group. The focus of the role is administering a Linux cluster, supporting research scientists with some data modeling, supporting various relational databases etc. The Bioinformatics group will be moving to Cambridge so they will be replacing/upgrading the existing Linux cluster. The ideal candidate will have prior experience supporting several PhD level scientists with computational backgrounds, virology/biology as well as many other disciplines. It is a very visible role in that there is a huge initiative to strengthen the IS support specifically for the Bioinformatics organization. I've attached the job description and look forward to hearing your thoughts and interest level in exploring this opportunity. Thanks in advance for your time and if you know of anyone who might be interested, I'm available to chat live any day with some notice. The hourly pay rate range on a W-2 contract basis (will not consider 1099 candidates) and the rate range is approximately $45-75/hour based on education and experience. PROJECT DESCRIPTION* This SOW covers the costs associated with providing a Bioinformatics technical support resource in the R&D IS team as a resource to participate in and support the following R&D IS activities and projects: · Implementing, testing and and managing applications used by Scientists working in the Sanofi Pasteur R&D Global Bioinformatics and Genomics group. This group uses both commercial and proprietary scientific computing applications running on LINUX, Mac OS X, Solaris, and Windows. · Resource will be responsible for providing application support, including building applications from source, managing the deployment and scheduling of software applications on Unix/Linux clusters, migrating and configuring applications and ensuring inter-operability between applications. · Providing effective communication between the IS infrastructure team (who provide LINUX, UNIX, Windows, and Oracle support), the R&D IS team, and the business users. · Development of standardized data management (loading, updates, maintenance) and support procedures for specific applications, including Biowisdom SRS. · Providing training to users on specialized applications as needed. · Participating in the development and approval of standardized documentation for these processes, following Sanofi Pasteur documentation standards. · Maintaining a high level of client satisfaction while meeting response time guidelines. · Resolving Client Support Incidents and effectively communicate status, solutions and/or workarounds to clients. · Properly documenting actions taken on all work for Client Support Incidents. · Other specific projects to be defined by R&D IS management as needed. TIMEFRAME* The contractor is required from July 1, 2010 through to December 31, 2010, with the possibility of extension to 2011, depending on budget availability, project portfolio needs, and performance. DELIVERABLES In addition to the project-specific deliverables described in the Scope of Work, the following deliverables may be required from the contractor for each project worked on: Project Plan A high-level project plan using Microsoft Project will be developed in the early stage of each project. The plan will list high level timelines and resource requirements. This plan will be further refined once the requirements document is complete. This plan will be reviewed and approved by a Sanofi Pasteur R&D IS representative. If the contractor is not the project lead then they will provide input to this document. Requirements Document A requirements document will be developed in our IS eDoc document management system. This document will be developed through requirements gathering meetings with the business user and through requirements review sessions with the IS technical team. This document will be approved through the IS eDoc workflow process. If the contractor is not the project lead then they will need to provide input to this document. Development If the contractor is a developer on the project he/she will develop or modify the code necessary to meet the requirements document. He/she will also unit test the code that has been developed or modified prior to delivering it to the project lead and business user for user acceptance testing. If the contractor is the project lead he/she will provide direction to the developers throughout this stage. Testing The contractor will oversee the testing of the changes to the system by developing test scripts with the help of the business users. These test scripts will trace back to each individual requirement in the requirements document. These test scripts will be developed in IS eDoc and reviewed and approved through the IS eDoc workflow process. Implementation The contractor will oversee moving of the changes to the system into production. He/she will ensure all necessary documentation is approved and closed out in IS eDoc and the EPM time management system. POSITION REQUIRED (ROLE) A Technical Support Analyst with Bioinformatics experience is required for this role. Technical expertise requirements include: · Experience with Windows and Linux/UNIX operating systems are essential (Mac OS X and Solaris will be an asset), and experience with distributed computing is required. · Proficiency with RDBMS-based (MySQL, Postgresql, Oracle) applications and database concepts. · Proficiency with UNIX text processing tools and shell scripting. · Proficiency with a major programming language (e.g. C/C+); scripting languages (e.g. Perl, Python) · Understanding of web server, networking and network protocols. · Solid understanding of the software development cycle, including testing methodologies and change management control, and experience out-sourcing and managing software development, · Demonstrated previous experience supporting bioinformatics tools and applications. Examples may include molecular modeling applications, sequence analysis packages, genomic data analysis tools and data integration applications. · Able to use Microsoft Office tools. Professional requirements include: · Resourceful problem solver with excellent interpersonal and communication skills, including the ability to express technical ideas clearly · Able to work effectively within a team environment. · Good written and verbal communication skills required to deliver high quality Client Support and reliable follow-up to clients. · Demonstrated ability to promptly handle problems, providing status updates, and documenting the problem and resolution. · Present technical & functional ideas clearly while checking for client understanding. · Experience in developing technical documentation. · Experience with software testing, including development of test plans and detailed test scripts based on requirements and design documentation. SKILLS REQUIRED * The candidates must possess the following skills/education: A Bachelor’s degree in Computer Science, Engineering or equivalent. Best, Kathleen McTeague Senior Staffing Consultant Randstad Life Science Staffing 617-354-7215 kathleen.mcteague(a)us.randstad.com<mailto:kathleen.mcteague@us.randstad.com>

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IBM ThinkPad T22 for sale; $50
by Tatsh July 26, 2010

July 26, 2010

Hard drive emptied. Has a license for Windows 2000 on the bottom. - 15" screen, has a line going through it near the top that sometimes visible, sometimes white, sometimes black; probably not repairable without a replacement - DVD-ROM drive working but funky with eject; swappable with floppy drive (included) - Battery completely drained - Comes with docking station (which has power button, ethernet, VGA, DVI, serial, 1xUSB, PS/2 ports for mouse and keyboard, audio out and mic in, and a port used by some PCMCIA cards I can't remember what it's called (small)) - Comes with AC Adapter - 2x128MB RAM; fully tested OK - Pentium III @ 700 MHz - Video card is an Intel variant of the time $50 sold. Call me at 978-870-5908 (Andy). Thanks -- Tatsh www.tatsh.net ddrtist(a)gmail.com

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Linux rebotics??
by Ken Jones July 20, 2010

July 20, 2010

Are you all aware of any robot clubs in eastern Massachusetts. I am interested in robots in general, but even more interested in Linux robotics. Are there any break through products you know about? I have not searched the web. This email is a spur of the moment action. Ken

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Re: [Wlug] Wlug Digest, Vol 81, Issue 7
by Caobin zhu July 10, 2010

July 10, 2010

Hi, I am interested in your thinkpad. can you give a little more detail about it? like what's the model number and screen size? is the battery still charging working/ does it come with a DVD-drive and/floppy? is the drive removable? how big is the hard disk size? and what is the cpu and memory size etc... thanks. > From: wlug-request(a)mail.wlug.org > Subject: Wlug Digest, Vol 81, Issue 7 > To: wlug(a)mail.wlug.org > Date: Sat, 10 Jul 2010 12:00:03 -0400 > > Send Wlug mailing list submissions to > wlug(a)mail.wlug.org > > To subscribe or unsubscribe via the World Wide Web, visit > http://mail.wlug.org/mailman/listinfo/wlug > or, via email, send a message with subject or body 'help' to > wlug-request(a)mail.wlug.org > > You can reach the person managing the list at > wlug-owner(a)mail.wlug.org > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Wlug digest..." > > > Today's Topics: > > 1. Classic car for sale (1963 Mercury Monterey 2 door), and a > ThinkPad! (Tatsh) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Fri, 9 Jul 2010 13:10:22 -0400 > From: Tatsh <ddrtist(a)gmail.com> > Subject: [Wlug] Classic car for sale (1963 Mercury Monterey 2 door), > and a ThinkPad! > To: wlug(a)mail.wlug.org > Message-ID: <201007091310.22714.ddrtist(a)gmail.com> > Content-Type: Text/Plain; charset="iso-8859-1" > > Hope this is appropriate. I prefer to do local sale only with cars so I > thought what the heck. > > Here are the details: > 1963 Mercury Monterey > Custom 2 Door Hardtop Breezeway > Here is a rare near-mint condition 2-door version of the 1963 Monterey. Barn > find! Engine compartment is very clean. This car frame and floor are solid. > The frame, floors and under carriage of this car are very clean. Car has been > primed white. Has installed 15" tires, and includes original 14" tires. > > Any questions? Just call 978-870-5908 (Andy) between 10 AM and 8 PM. > > Plenty of pictures here: > http://cgi.ebay.com/ebaymotors/ws/eBayISAPI.dll?ViewItem&item=280531424951 > > I'm 100% legit. My refs are on eBay. > > Also, what I might have for sale is an IBM ThinkPad (pre-Lenovo, came with > 2000 License). > -- > Andrew Udvare > 978-870-5908 > > > ------------------------------ > > _______________________________________________ > Wlug mailing list > Wlug(a)mail.wlug.org > http://mail.wlug.org/mailman/listinfo/wlug > > > End of Wlug Digest, Vol 81, Issue 7 > *********************************** _________________________________________________________________ Hotmail has tools for the New Busy. Search, chat and e-mail from your inbox. http://www.windowslive.com/campaign/thenewbusy?ocid=PID28326::T:WLMTAGL:ON:…

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PC to Home Stereo Solution
by Gary Hanley July 9, 2010

July 9, 2010

Is it me or is there no good solution to streaming your OGG and FLAC music files to your home stereo from Linux. Even the Windows solutions seem sparse and are usually proprietary. I have wanted to do this for a long time and every time I start googling for a solution I come up empty. Does anyone have any experience with this? I would appreciate your comments. Thanks, and Happy 4th! -- Gary

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Addonics Dual CF IDE adaptor for sale - 15.00
by Adam Keck July 7, 2010

July 7, 2010

Anyone interested in a Dual CF/IDE adaptor [1]? Unfortunately, I won't be able to do the project for which I bought it. I can bring it to the next meeting. Thanks, -Adam [1] http://www.addonics.com/products/flash_memory_reader/ad44midecf.asp

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Announce: WLUG Meeting Thursday July 8 7PM
by Chuck Anderson July 6, 2010

July 6, 2010

Hi folks, Our next WLUG meeting is scheduled to be held on Thursday, July 8 at 7:00 PM in Morgan Hall at the WPI campus in Worcester, MA USA. This is an informal open meeting. Anyone who is interested in a certain topic, feel free to come to the meeting and discuss it. There has been a lot of talk about streaming music to stereo systems, so I suggest we talk about that. We'll also discuss the WLUG BBQ which is on for August! We'll go out for pizza afterwards. The meeting room is in WPI's Morgan Hall (building 'H' on the campus map [1]), down the hallway to the right of the dining hall entrance. [1] http://www.wpi.edu/Images/CMS/WPI/walkingmap.pdf I look forward to seeing you there, Chuck President, Worcester Linux Users' Group

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LinuxCon 2010 in Boston, August 10-12
by Chuck Anderson June 28, 2010

June 28, 2010

Nichola Mente from The Linux Foundation asked me to post this event notification and discount code: Hello WLUG Members: LinuxCon 2010 will be held in Boston this Aug 10-12, and we would like to offer each of you a discount on registration fees as local community members. Information, schedule and registration can be found on our website: http://events.linuxfoundation.org/events/linuxcon When registering, please use this code to receive a 20% discount: LCB_UG20 Happy Monday! Nichola

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Grub and E-Waste
by ted June 26, 2010

June 26, 2010

Two somewhat related questions. I went to a USB keyboard after my PS keyboard broke. I am running Ubuntu 10.04. How do I get GRUB to recognize the keyboard? Second, where do I get rid of the broken keyboard? Does Worcester have an E-Waste recycling center? Thanks. Ted

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BBQ and My Keyboard
by ted June 26, 2010

June 26, 2010

> Chuck Anderson wrote: > > I neglected to bring up this topic at our last meeting. We usually > > have a WLUG summer BBQ around July or August, so I'd like to get the > > planning discussion going now. Are people interested in having a BBQ > > this year, and if so, would someone be willing to host it? WLUG > > should enough in the bank to fund the food (Andy can you confirm?), so > > all we need is a place with a BBQ grill and a time. > > > > Comments? Ideas? I love to BBQ. I don't have a good space for hosting, but can we use one of the many fine parks in Worcester? Thats the way we rolled in Joisey. As for my USB Keyboard, the BIOS had a switch to turn on USB Keyboards and the Mouse (though I never needed the mouse for grub). Thanks for the help! Ted

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RFC: WLUG BBQ July/August timeframe
by Chuck Anderson June 25, 2010

June 25, 2010

I neglected to bring up this topic at our last meeting. We usually have a WLUG summer BBQ around July or August, so I'd like to get the planning discussion going now. Are people interested in having a BBQ this year, and if so, would someone be willing to host it? WLUG should enough in the bank to fund the food (Andy can you confirm?), so all we need is a place with a BBQ grill and a time. Comments? Ideas? -Chuck

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Converting VSAM files
by Michael Long June 24, 2010

June 24, 2010

Hi: I have a project in which I need to migrate some data stored in VSAM files to a relational database (mssql). I am wondering if anyone has had experience with extracting data from a VSAM file to a flat file. If so what tools would you recommend to make this happen. tia, Mike

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232-TTL, locally?
by soup June 8, 2010

June 8, 2010

Anyone know of a hobby/electronics shop where I could get a 232-TTL dongle, board or kit? Even just a bare MAX232 IC would be cool. I don't want to have to drive up to you-do-it, that's the only place I can think of that's left... Take care, soup

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Announce: WLUG Meeting Wednesday June 9 7PM
by Chuck Anderson June 8, 2010

June 8, 2010

Hi folks, Our next WLUG meeting is scheduled to be held on Wednesday, June 9 at 7:00 PM in Morgan Hall at the WPI campus in Worcester, MA USA. This is an informal open meeting. Anyone who is interested in a certain topic, feel free to come to the meeting and discuss it. We'll go out for pizza afterwards. The meeting room is in WPI's Morgan Hall (building 'H' on the campus map [1]), down the hallway to the right of the dining hall entrance. [1] http://www.wpi.edu/Images/CMS/WPI/walkingmap.pdf I look forward to seeing you there, Chuck President, Worcester Linux Users' Group

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Re: [Wlug] Wlug Digest, Vol 80, Issue 1 - AWK
by Steven Greenberg June 2, 2010

June 2, 2010

#!/bin/tcsh awk -F\| '$3 == "" {print}' < test.txt 109: ./awk.csh One|two||four|Five|Six One|two||four|Five|Six wlug-request(a)mail.wlug.org wrote: > Send Wlug mailing list submissions to > wlug(a)mail.wlug.org > > To subscribe or unsubscribe via the World Wide Web, visit > http://mail.wlug.org/mailman/listinfo/wlug > or, via email, send a message with subject or body 'help' to > wlug-request(a)mail.wlug.org > > You can reach the person managing the list at > wlug-owner(a)mail.wlug.org > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Wlug digest..." > > > ------------------------------------------------------------------------ > > Today's Topics: > > 1. Awk Null Field (Gary Hanley) > 2. Re: Awk Null Field (Jorden M) > 3. Re: Awk Null Field (Gary Hanley) > 4. Re: Awk Null Field (Jorden M) > 5. Re: Awk Null Field (Gary Hanley) > 6. Re: Awk Null Field (Jorden M) > 7. Re: Awk Null Field (Theo Van Dinter) > 8. Re: Awk Null Field (Gary Hanley) > > > ------------------------------------------------------------------------ > > Subject: > [Wlug] Awk Null Field > From: > Gary Hanley <gary(a)hanley.net> > Date: > Tue, 1 Jun 2010 16:00:26 -0400 (EDT) > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > Wow, what's wrong with me? I'm trying to parse a file to eliminate any > line from the file to the output where a particular field is is null. > The 8th field in this case. > > I can't get it right! I haven't done an awk script in a long time but > this should be simple stuff. > > Basically I'm trying to do: > > cat file | awk -F\| '$8 !~ <NULL expression> {print}' > > Any help would be appreciated. > > Thanks. > > -- Gary > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Jorden M <jrm8005(a)gmail.com> > Date: > Tue, 1 Jun 2010 16:26:23 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > Just check NF. > > On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley <gary(a)hanley.net> wrote: >> Wow, what's wrong with me? I'm trying to parse a file to >> eliminate any line from the file to the output where a particular >> field is is null. The 8th field in this case. >> >> I can't get it right! I haven't done an awk script in a long time but >> this should be simple stuff. >> >> Basically I'm trying to do: >> >> cat file | awk -F\| '$8 !~ <NULL expression> {print}' >> >> Any help would be appreciated. >> >> Thanks. >> >> -- Gary >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Gary Hanley <gary(a)hanley.net> > Date: > Tue, 01 Jun 2010 17:08:46 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > Thanks, but that won't help here. Maybe I should have mentioned the > fields are delimited by "|" and there is more than eight fields per record. > > I think this might be more complicated than I assumed. Thanks anyway. > > -- Gary > > On 06/01/2010 04:26 PM, Jorden M wrote: >> Just check NF. >> >> On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley<gary(a)hanley.net> wrote: >>> Wow, what's wrong with me? I'm trying to parse a file to >>> eliminate any line from the file to the output where a particular >>> field is is null. The 8th field in this case. >>> >>> I can't get it right! I haven't done an awk script in a long time but >>> this should be simple stuff. >>> >>> Basically I'm trying to do: >>> >>> cat file | awk -F\| '$8 !~<NULL expression> {print}' >>> >>> Any help would be appreciated. >>> >>> Thanks. >>> >>> -- Gary >>> _______________________________________________ >>> Wlug mailing list >>> Wlug(a)mail.wlug.org >>> http://mail.wlug.org/mailman/listinfo/wlug >>> >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> >> > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Jorden M <jrm8005(a)gmail.com> > Date: > Tue, 1 Jun 2010 17:14:36 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > What will happen if the field is null? Two pipes? Or will there be > space in between? > > On Tue, Jun 1, 2010 at 5:08 PM, Gary Hanley <gary(a)hanley.net> wrote: >> Thanks, but that won't help here. Maybe I should have mentioned the >> fields are delimited by "|" and there is more than eight fields per record. >> >> I think this might be more complicated than I assumed. Thanks anyway. >> >> -- Gary >> >> On 06/01/2010 04:26 PM, Jorden M wrote: >>> Just check NF. >>> >>> On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley<gary(a)hanley.net> wrote: >>>> Wow, what's wrong with me? I'm trying to parse a file to >>>> eliminate any line from the file to the output where a particular >>>> field is is null. The 8th field in this case. >>>> >>>> I can't get it right! I haven't done an awk script in a long time but >>>> this should be simple stuff. >>>> >>>> Basically I'm trying to do: >>>> >>>> cat file | awk -F\| '$8 !~<NULL expression> {print}' >>>> >>>> Any help would be appreciated. >>>> >>>> Thanks. >>>> >>>> -- Gary >>>> _______________________________________________ >>>> Wlug mailing list >>>> Wlug(a)mail.wlug.org >>>> http://mail.wlug.org/mailman/listinfo/wlug >>>> >>> _______________________________________________ >>> Wlug mailing list >>> Wlug(a)mail.wlug.org >>> http://mail.wlug.org/mailman/listinfo/wlug >>> >>> >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> > > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Gary Hanley <gary(a)hanley.net> > Date: > Tue, 01 Jun 2010 17:22:05 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > There will be a space. > > -- Gary > > On 06/01/2010 05:14 PM, Jorden M wrote: >> What will happen if the field is null? Two pipes? Or will there be >> space in between? >> >> On Tue, Jun 1, 2010 at 5:08 PM, Gary Hanley<gary(a)hanley.net> wrote: >>> Thanks, but that won't help here. Maybe I should have mentioned the >>> fields are delimited by "|" and there is more than eight fields per >>> record. >>> >>> I think this might be more complicated than I assumed. Thanks anyway. >>> >>> -- Gary >>> >>> On 06/01/2010 04:26 PM, Jorden M wrote: >>>> Just check NF. >>>> >>>> On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley<gary(a)hanley.net> wrote: >>>>> Wow, what's wrong with me? I'm trying to parse a file to >>>>> eliminate any line from the file to the output where a particular >>>>> field is is null. The 8th field in this case. >>>>> >>>>> I can't get it right! I haven't done an awk script in a long time but >>>>> this should be simple stuff. >>>>> >>>>> Basically I'm trying to do: >>>>> >>>>> cat file | awk -F\| '$8 !~<NULL expression> {print}' >>>>> >>>>> Any help would be appreciated. >>>>> >>>>> Thanks. >>>>> >>>>> -- Gary >>>>> _______________________________________________ >>>>> Wlug mailing list >>>>> Wlug(a)mail.wlug.org >>>>> http://mail.wlug.org/mailman/listinfo/wlug >>>>> >>>> _______________________________________________ >>>> Wlug mailing list >>>> Wlug(a)mail.wlug.org >>>> http://mail.wlug.org/mailman/listinfo/wlug >>>> >>>> >>> _______________________________________________ >>> Wlug mailing list >>> Wlug(a)mail.wlug.org >>> http://mail.wlug.org/mailman/listinfo/wlug >>> >> >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> >> > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Jorden M <jrm8005(a)gmail.com> > Date: > Tue, 1 Jun 2010 17:24:38 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > So match "| |"? Or perhaps "|[ ]?|"? > > Or will that not work? > > On Tue, Jun 1, 2010 at 5:22 PM, Gary Hanley <gary(a)hanley.net> wrote: >> There will be a space. >> >> -- Gary >> >> On 06/01/2010 05:14 PM, Jorden M wrote: >>> What will happen if the field is null? Two pipes? Or will there be >>> space in between? >>> >>> On Tue, Jun 1, 2010 at 5:08 PM, Gary Hanley<gary(a)hanley.net> wrote: >>>> Thanks, but that won't help here. Maybe I should have mentioned the >>>> fields are delimited by "|" and there is more than eight fields per record. >>>> >>>> I think this might be more complicated than I assumed. Thanks anyway. >>>> >>>> -- Gary >>>> >>>> On 06/01/2010 04:26 PM, Jorden M wrote: >>>>> Just check NF. >>>>> >>>>> On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley<gary(a)hanley.net> wrote: >>>>>> Wow, what's wrong with me? I'm trying to parse a file to >>>>>> eliminate any line from the file to the output where a particular >>>>>> field is is null. The 8th field in this case. >>>>>> >>>>>> I can't get it right! I haven't done an awk script in a long time but >>>>>> this should be simple stuff. >>>>>> >>>>>> Basically I'm trying to do: >>>>>> >>>>>> cat file | awk -F\| '$8 !~<NULL expression> {print}' >>>>>> >>>>>> Any help would be appreciated. >>>>>> >>>>>> Thanks. >>>>>> >>>>>> -- Gary >>>>>> _______________________________________________ >>>>>> Wlug mailing list >>>>>> Wlug(a)mail.wlug.org >>>>>> http://mail.wlug.org/mailman/listinfo/wlug >>>>>> >>>>> _______________________________________________ >>>>> Wlug mailing list >>>>> Wlug(a)mail.wlug.org >>>>> http://mail.wlug.org/mailman/listinfo/wlug >>>>> >>>>> >>>> _______________________________________________ >>>> Wlug mailing list >>>> Wlug(a)mail.wlug.org >>>> http://mail.wlug.org/mailman/listinfo/wlug >>>> >>> _______________________________________________ >>> Wlug mailing list >>> Wlug(a)mail.wlug.org >>> http://mail.wlug.org/mailman/listinfo/wlug >>> >>> >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> > > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Theo Van Dinter <felicity(a)kluge.net> > Date: > Tue, 1 Jun 2010 17:48:32 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > Unless I'm missing something, you should just be able to do ... awk > -F\| '$8 {print}' > > > On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley <gary(a)hanley.net> wrote: >> Wow, what's wrong with me? I'm trying to parse a file to >> eliminate any line from the file to the output where a particular >> field is is null. The 8th field in this case. >> >> I can't get it right! I haven't done an awk script in a long time but >> this should be simple stuff. >> >> Basically I'm trying to do: >> >> cat file | awk -F\| '$8 !~ <NULL expression> {print}' >> >> Any help would be appreciated. >> >> Thanks. >> >> -- Gary >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> > > > ------------------------------------------------------------------------ > > Subject: > Re: [Wlug] Awk Null Field > From: > Gary Hanley <gary(a)hanley.net> > Date: > Tue, 01 Jun 2010 17:46:17 -0400 > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > To: > Worcester Linux Users Group <wlug(a)mail.wlug.org> > > > No, that doesn't work. Here's how I tried it. > > My play file. Notice records two and four: > One|two|three|four|Five|Six > One|two||four|Five|Six > One|two|three|four|Five|Six > One|two||four|Five|Six > One|two|three|four|Five|Six > One|two|three|four|Five|Six > > Here's the output. Should have returned two records: > cat file.txt | awk -F\| '$3 = "| |" {print}' > One two | | four Five Six > One two | | four Five Six > One two | | four Five Six > One two | | four Five Six > One two | | four Five Six > One two | | four Five Six > > And: > cat file.txt | awk -F\| '$3 = "|[ ]?|" {print}' > One two |[ ]?| four Five Six > One two |[ ]?| four Five Six > One two |[ ]?| four Five Six > One two |[ ]?| four Five Six > One two |[ ]?| four Five Six > One two |[ ]?| four Five Six > > I'm probably have to refresh myself with the regular expression stuff > and build a script. Not a bad thing I guess. Somehow I just assumed > checking for a blank field in awk was a no-brainer. Now I'm going to > have to think. :-\ > > Thanks Jorden. > > -- Gary > > On 06/01/2010 05:24 PM, Jorden M wrote: >> So match "| |"? Or perhaps "|[ ]?|"? >> >> Or will that not work? >> >> On Tue, Jun 1, 2010 at 5:22 PM, Gary Hanley<gary(a)hanley.net> wrote: >>> There will be a space. >>> >>> -- Gary >>> >>> On 06/01/2010 05:14 PM, Jorden M wrote: >>>> What will happen if the field is null? Two pipes? Or will there be >>>> space in between? >>>> >>>> On Tue, Jun 1, 2010 at 5:08 PM, Gary Hanley<gary(a)hanley.net> wrote: >>>>> Thanks, but that won't help here. Maybe I should have mentioned the >>>>> fields are delimited by "|" and there is more than eight fields per >>>>> record. >>>>> >>>>> I think this might be more complicated than I assumed. Thanks anyway. >>>>> >>>>> -- Gary >>>>> >>>>> On 06/01/2010 04:26 PM, Jorden M wrote: >>>>>> Just check NF. >>>>>> >>>>>> On Tue, Jun 1, 2010 at 4:00 PM, Gary Hanley<gary(a)hanley.net> >>>>>> wrote: >>>>>>> Wow, what's wrong with me? I'm trying to parse a file to >>>>>>> eliminate any line from the file to the output where a particular >>>>>>> field is is null. The 8th field in this case. >>>>>>> >>>>>>> I can't get it right! I haven't done an awk script in a long time >>>>>>> but >>>>>>> this should be simple stuff. >>>>>>> >>>>>>> Basically I'm trying to do: >>>>>>> >>>>>>> cat file | awk -F\| '$8 !~<NULL expression> {print}' >>>>>>> >>>>>>> Any help would be appreciated. >>>>>>> >>>>>>> Thanks. >>>>>>> >>>>>>> -- Gary >>>>>>> _______________________________________________ >>>>>>> Wlug mailing list >>>>>>> Wlug(a)mail.wlug.org >>>>>>> http://mail.wlug.org/mailman/listinfo/wlug >>>>>>> >>>>>> _______________________________________________ >>>>>> Wlug mailing list >>>>>> Wlug(a)mail.wlug.org >>>>>> http://mail.wlug.org/mailman/listinfo/wlug >>>>>> >>>>>> >>>>> _______________________________________________ >>>>> Wlug mailing list >>>>> Wlug(a)mail.wlug.org >>>>> http://mail.wlug.org/mailman/listinfo/wlug >>>>> >>>> >>>> _______________________________________________ >>>> Wlug mailing list >>>> Wlug(a)mail.wlug.org >>>> http://mail.wlug.org/mailman/listinfo/wlug >>>> >>>> >>> _______________________________________________ >>> Wlug mailing list >>> Wlug(a)mail.wlug.org >>> http://mail.wlug.org/mailman/listinfo/wlug >>> >> >> _______________________________________________ >> Wlug mailing list >> Wlug(a)mail.wlug.org >> http://mail.wlug.org/mailman/listinfo/wlug >> >> > > > ------------------------------------------------------------------------ > > _______________________________________________ > Wlug mailing list > Wlug(a)mail.wlug.org > http://mail.wlug.org/mailman/listinfo/wlug -- Steven Greenberg Email: steve(a)ssgreenberg.name 251 Holland Rd. Phone: (774)241-0095 Fiskdale, Massachusetts 01518-1231 Web: http://www.ssgreenberg.name Other Email: s.greenberg(a)ieee.org ssg(a)alum.mit.edu

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Awk Null Field
by Gary Hanley June 1, 2010

June 1, 2010

Wow, what's wrong with me? I'm trying to parse a file to eliminate any line from the file to the output where a particular field is is null. The 8th field in this case. I can't get it right! I haven't done an awk script in a long time but this should be simple stuff. Basically I'm trying to do: cat file | awk -F\| '$8 !~ <NULL expression> {print}' Any help would be appreciated. Thanks. -- Gary

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Help with Xen Server Setup
by Simon Kigo May 28, 2010

May 28, 2010

I have a HP DL385 G6 server that I want to put into production. I'm looking for someone who would like to have fun implementing this project with me. Thanks in advance. Below is a summary of our goals Setup Bios configurationSetup iLO managerInstall additional 4 Gig Ram in serverInstall two SAS and 1 SATA drives in a RAID configuration of our choice Install Xen server for virtualization Setup virtual serversHarden server security Your input and experience are highly valued. I'm very open to your tips/suggestions. --- On Thu, 5/27/10, wlug-request(a)mail.wlug.org <wlug-request(a)mail.wlug.org> wrote: From: wlug-request(a)mail.wlug.org <wlug-request(a)mail.wlug.org> Subject: Wlug Digest, Vol 79, Issue 19 To: wlug(a)mail.wlug.org Date: Thursday, May 27, 2010, 9:27 PM Send Wlug mailing list submissions to wlug(a)mail.wlug.org To subscribe or unsubscribe via the World Wide Web, visit http://mail.wlug.org/mailman/listinfo/wlug or, via email, send a message with subject or body 'help' to wlug-request(a)mail.wlug.org You can reach the person managing the list at wlug-owner(a)mail.wlug.org When replying, please edit your Subject line so it is more specific than "Re: Contents of Wlug digest..." Today's Topics: 1. Please indulge me. (Ken Jones) 2. Re: Please indulge me. (Jorden M) 3. Re: Please indulge me. (John Stoffel) 4. Re: Please indulge me. (Justin St. Marie) 5. Re: 232-TTL, locally? (Adam Gomes) 6. Re: 232-TTL, locally? (Mike Leo) 7. Re: 232-TTL, locally? (soup) ---------------------------------------------------------------------- Message: 1 Date: Thu, 27 May 2010 13:33:22 -0400 From: "Ken Jones" <kjones(a)ziplink.net> Subject: [Wlug] Please indulge me. To: <wlug(a)mail.wlug.org> Message-ID: <0996212B4EF345DEADBB060626610B8B@kjonespc> Content-Type: text/plain; format=flowed; charset="iso-8859-1"; reply-type=original When I was teenager a Model T Ford was an old car. My friend bought one for $25. He painted it yellow and orange, cranked it up and rode it around town with his girl friend in the passenger's seat and a case of beer in the rumble seat. Some years later we realized how much fun that was. Same's true for computers. Disclaimer ==> I have not tampered with SUN's choice of color scheme. Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ ======= ------------------------------ Message: 2 Date: Thu, 27 May 2010 14:13:31 -0400 From: Jorden M <jrm8005(a)gmail.com> Subject: Re: [Wlug] Please indulge me. To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Message-ID: <AANLkTikuJcn6o3w9rOWF7oexg7K4xG6G5aXjCkHM9bvs(a)mail.gmail.com> Content-Type: text/plain; charset=ISO-8859-1 You have to admit yellow and orange would be cooler than the gray and desaturated purple, though. On Thu, May 27, 2010 at 1:33 PM, Ken Jones <kjones(a)ziplink.net> wrote: > When I was teenager a Model T Ford was an old car. ?My friend bought one for > $25. ?He painted it yellow and orange, cranked it up and rode it around town > with his girl friend in the passenger's seat and a case of beer in the > rumble seat. ? ?Some years later we realized how much fun that was. > > Same's true for computers. > > Disclaimer ==> I have not tampered with SUN's choice of color scheme. > > Ken > > > > > > ======= > Email scanned by PC Tools - No viruses or spyware found. > (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) > http://www.pctools.com/ > ======= > _______________________________________________ > Wlug mailing list > Wlug(a)mail.wlug.org > http://mail.wlug.org/mailman/listinfo/wlug > ------------------------------ Message: 3 Date: Thu, 27 May 2010 14:22:31 -0400 From: "John Stoffel" <john(a)stoffel.org> Subject: Re: [Wlug] Please indulge me. To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Message-ID: <19454.47207.822003.553229(a)stoffel.org> Content-Type: text/plain; charset=us-ascii Jorden> You have to admit yellow and orange would be cooler than the Jorden> gray and desaturated purple, though. And pithy saying like "Four wheels, no brakes!" on the car. I guess on the sun you could have... umm... "256Mb, no Swap!" or something equally silly. But yes, please don't let me stop you! I ran em myslef for years. John ------------------------------ Message: 4 Date: Thu, 27 May 2010 14:26:01 -0400 From: "Justin St. Marie" <stmariejw(a)gmail.com> Subject: Re: [Wlug] Please indulge me. To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Message-ID: <AANLkTimAwPYVG5nslT0FOo3U7R5cQ2Ko7kmsSM5njY2g(a)mail.gmail.com> Content-Type: text/plain; charset="iso-8859-1" Came across this.... old sun stuff not too far away (Lawrence) http://boston.craigslist.org/nwb/sys/1753114433.html On Thu, May 27, 2010 at 2:22 PM, John Stoffel <john(a)stoffel.org> wrote: > > Jorden> You have to admit yellow and orange would be cooler than the > Jorden> gray and desaturated purple, though. > > And pithy saying like "Four wheels, no brakes!" on the car. I guess > on the sun you could have... umm... "256Mb, no Swap!" or something > equally silly. > > But yes, please don't let me stop you! I ran em myslef for years. > > John > _______________________________________________ > Wlug mailing list > Wlug(a)mail.wlug.org > http://mail.wlug.org/mailman/listinfo/wlug > -- Justin St. Marie, RHCT Systems Engineer -------------- next part -------------- An HTML attachment was scrubbed... URL: http://mail.wlug.org/pipermail/wlug/attachments/20100527/4bc60591/attachmen… ------------------------------ Message: 5 Date: Thu, 27 May 2010 15:14:20 -0400 From: Adam Gomes <adam(a)unixgeek.net> Subject: Re: [Wlug] 232-TTL, locally? To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Message-ID: <AANLkTimxycUdvw3QgZbgEVXPkEv9KDOz5ivW1D72vSRn(a)mail.gmail.com> Content-Type: text/plain; charset="iso-8859-1" How "local"? Is Pawtucket, RI too far for you? Jabour Electronics might have one, but I'm not sure if that's any closer to you than you-do-it. On Fri, May 21, 2010 at 8:15 PM, Tom Misilo <tmisilo(a)gmail.com> wrote: > If you cannot find anything locally, I would recommend picking up this: > > http://www.sparkfun.com/commerce/product_info.php?products_id=9718 > > It is a USB cable with a built in FTDI Chip. Very good support for > Linux and Windows alike. > > They also make cables that can be found at www.mouser.com that do not > have the 6pin .1 header, but bare tinned wires. > > Tom > > On Fri, May 21, 2010 at 7:03 PM, soup <soupforare(a)gmail.com> wrote: > > Anyone know of a hobby/electronics shop where I could get a 232-TTL > > dongle, board or kit? Even just a bare MAX232 IC would be cool. > > I don't want to have to drive up to you-do-it, that's the only place I > > can think of that's left... > > > > Take care, > > soup > > _______________________________________________ > > Wlug mailing list > > Wlug(a)mail.wlug.org > > http://mail.wlug.org/mailman/listinfo/wlug > > > > _______________________________________________ > Wlug mailing list > Wlug(a)mail.wlug.org > http://mail.wlug.org/mailman/listinfo/wlug > -------------- next part -------------- An HTML attachment was scrubbed... URL: http://mail.wlug.org/pipermail/wlug/attachments/20100527/259c54f9/attachmen… ------------------------------ Message: 6 Date: Thu, 27 May 2010 12:21:04 -0700 (PDT) From: Mike Leo <mleo963(a)yahoo.com> Subject: Re: [Wlug] 232-TTL, locally? To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Message-ID: <480259.80441.qm(a)web51306.mail.re2.yahoo.com> Content-Type: text/plain; charset="us-ascii" http://eli.com/ might also have what you are looking for, though I'm not really following this thread that closely! ________________________________ From: Adam Gomes <adam(a)unixgeek.net> To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Sent: Thu, May 27, 2010 3:14:20 PM Subject: Re: [Wlug] 232-TTL, locally? How "local"? Is Pawtucket, RI too far for you? Jabour Electronics might have one, but I'm not sure if that's any closer to you than you-do-it. On Fri, May 21, 2010 at 8:15 PM, Tom Misilo <tmisilo(a)gmail.com> wrote: If you cannot find anything locally, I would recommend picking up this: > >http://www.sparkfun.com/commerce/product_info.php?products_id=9718 > >>It is a USB cable with a built in FTDI Chip. Very good support for >>Linux and Windows alike. > >>They also make cables that can be found at www.mouser.com that do not >>have the 6pin .1 header, but bare tinned wires. > >>Tom > > >>On Fri, May 21, 2010 at 7:03 PM, soup <soupforare(a)gmail.com> wrote: >>> Anyone know of a hobby/electronics shop where I could get a 232-TTL >>> dongle, board or kit? Even just a bare MAX232 IC would be cool. >>> I don't want to have to drive up to you-do-it, that's the only place I >>> can think of that's left... >>> >>> Take care, >>> soup >>> _______________________________________________ >>> Wlug mailing list >>> Wlug(a)mail.wlug.org >>> http://mail.wlug.org/mailman/listinfo/wlug >>> > >>_______________________________________________ >>Wlug mailing list >Wlug(a)mail.wlug.org >http://mail.wlug.org/mailman/listinfo/wlug > -------------- next part -------------- An HTML attachment was scrubbed... URL: http://mail.wlug.org/pipermail/wlug/attachments/20100527/698d7f70/attachmen… ------------------------------ Message: 7 Date: Thu, 27 May 2010 21:27:43 -0400 From: soup <soupforare(a)gmail.com> Subject: Re: [Wlug] 232-TTL, locally? To: Worcester Linux Users Group <wlug(a)mail.wlug.org> Message-ID: <4BFF1C0F.4080709(a)gmail.com> Content-Type: text/plain; charset=ISO-8859-1; format=flowed On 5/27/2010 3:21 PM, Mike Leo wrote: > http://eli.com/ might also have what you are looking for, though I'm > not really following this thread that closely! > Unfortunately, eli is almost entirely computer stuff now, they used to be randomly good for surplus. Thanks to all replies! I ended up heading to you-do-it. They only had some MAX clone ICs, but good enough, worked out in the end. Take care, soup ------------------------------ _______________________________________________ Wlug mailing list Wlug(a)mail.wlug.org http://mail.wlug.org/mailman/listinfo/wlug End of Wlug Digest, Vol 79, Issue 19 ************************************

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Please indulge me.
by Ken Jones May 27, 2010

May 27, 2010

When I was teenager a Model T Ford was an old car. My friend bought one for $25. He painted it yellow and orange, cranked it up and rode it around town with his girl friend in the passenger's seat and a case of beer in the rumble seat. Some years later we realized how much fun that was. Same's true for computers. Disclaimer ==> I have not tampered with SUN's choice of color scheme. Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ =======

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Two more questions....
by Ken Jones May 26, 2010

May 26, 2010

My goal is to get Fedora 12-Beta up and running on my ULTRA1 Sparc. When I tried installing it the system did not like my DISC 1. 1. I would like to check the checksums on the six CD's that I made from your fedora 12-Beta source. I read that the only way is to shutdown, do "STOP a" and type "Linux mediacheck". My system does not recognize the "Linux mediacheck" command. Is there no way to do this operation from within a running Aurora system? 2. I have checked. I really have two identical Aurora systems on my two hard drives. The older one on the 17Gig drive from the ULTRA1 that died does not boot correctly. The newer version on the 3.4 Gig disk is from last week's successful installation of that same antique five CD .iso set. That new installation had to be limited because of a problem with a language file supporting emacs. I would like to be running a modern Aurora, but still keep my archive files. Any suggestions for a plan of action would be greatly appreciated. Ken Jones Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ =======

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Re: [Wlug] One more question.
by Eric Martin May 26, 2010

May 26, 2010

usually its .profile or .csh_profile or something to that effect. Like james said, google is your friend. Also, chances are you're using bash so its .bashrc eric On May 25, 2010 10:04 PM, "James Gray" <jamespgray(a)gmail.com> wrote: On Tue, May 25, 2010 at 9:15 PM, Ken Jones <kjones(a)ziplink.net> wrote: > Which configuration process... For bash you can add the commands to set these variables for bash in .bashrc if you use a different shell you'll need to edit a different file. Google should be able to help you with this. You can set variables system wide (all users) by editing /etc/profile (or at least that is where ubuntu puts it). Thanks! _______________________________________________ Wlug mailing list Wlug(a)mail.wlug.org http://mail.wlu...

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One more question.
by Ken Jones May 26, 2010

May 26, 2010

Which configuration process creates the environmental variables? I want to permanently add to my PATH. Presently I do it every time I logon. Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ =======

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Eric, this is the one.
by Ken Jones May 25, 2010

May 25, 2010

Yes, Eric, this is the ULTRA 1 Creator you gave me. It had been my backup machine. Now it is center stage. Seems to be doing fine. My problems have been with installing a modern version of Aurora. Previously it had been running Gentoo without X. Thanks. Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ =======

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I was all mixed up.
by Ken Jones May 24, 2010

May 24, 2010

My ULTRA1 hard drives do not have a separate four pin power connector. That's the CD drive. Here's what one of my hard drives says: Seagate Barracuda Model ST32171WC It has a connector with about 76 pins. They are too small for me to count accurately. ---------------------------------------- I have decided to stick with my present installation of a 2004 Aurora package on my 3.2 Gig disk. I can mount my old Linux disk so I can get at the files I wish to preserve. I can even back them up. I think I can RPM some newer versions from the WEB. I have a brand new Fedora 12 Beta packages disk that refused to load. Checksum?? Gotta get Md5sum going... Thank you for all your support and tell me when you get a PDP10 or 11 working. Inputting from punched paper telegraph tape will bring back memories. Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ =======

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mine has a separate power cord
by Ken Jones May 23, 2010

May 23, 2010

Thanks, Chuck, for noting the two variations. My ULTRA 1 has an oval connector with 68 (I did not count them) pins and a separate four wire power cord. Ken ======= Email scanned by PC Tools - No viruses or spyware found. (Email Guard: 7.0.0.18, Virus/Spyware Database: 6.15050) http://www.pctools.com/ =======

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Need a bigger SCSI disk
by Ken Jones May 22, 2010

May 22, 2010

John, Yes this is one of those oval connectors. It is designated as sdb which (I always thought) means the second SCSI drive disk. I'd be glad to take a drive to where ever you are for a 35Gig drive. Ken

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