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Professional networking for Bioinformatics Linux Support resource
by Kathleen McTeague July 28, 2010

July 28, 2010

Greetings, I'm reaching out to do some professional networking to see if I can send out a unique job posting to the Worcester Linux User Group. We are looking for a seasoned Linux Admin for a unique role to work for the vaccine division of a local pharmaceutical company based here in Cambridge, MA. This position is a long-term contract approved through the end of this year with the likelihood of extending long-term, possibly perm. The role will have 'one foot' in IS, and the other in the Bioinformatics group. The focus of the role is administering a Linux cluster, supporting research scientists with some data modeling, supporting various relational databases etc. The Bioinformatics group will be moving to Cambridge so they will be replacing/upgrading the existing Linux cluster. The ideal candidate will have prior experience supporting several PhD level scientists with computational backgrounds, virology/biology as well as many other disciplines. It is a very visible role in that there is a huge initiative to strengthen the IS support specifically for the Bioinformatics organization. I've attached the job description and look forward to hearing your thoughts and interest level in exploring this opportunity. Thanks in advance for your time and if you know of anyone who might be interested, I'm available to chat live any day with some notice. The hourly pay rate range on a W-2 contract basis (will not consider 1099 candidates) and the rate range is approximately $45-75/hour based on education and experience. PROJECT DESCRIPTION* This SOW covers the costs associated with providing a Bioinformatics technical support resource in the R&D IS team as a resource to participate in and support the following R&D IS activities and projects: · Implementing, testing and and managing applications used by Scientists working in the Sanofi Pasteur R&D Global Bioinformatics and Genomics group. This group uses both commercial and proprietary scientific computing applications running on LINUX, Mac OS X, Solaris, and Windows. · Resource will be responsible for providing application support, including building applications from source, managing the deployment and scheduling of software applications on Unix/Linux clusters, migrating and configuring applications and ensuring inter-operability between applications. · Providing effective communication between the IS infrastructure team (who provide LINUX, UNIX, Windows, and Oracle support), the R&D IS team, and the business users. · Development of standardized data management (loading, updates, maintenance) and support procedures for specific applications, including Biowisdom SRS. · Providing training to users on specialized applications as needed. · Participating in the development and approval of standardized documentation for these processes, following Sanofi Pasteur documentation standards. · Maintaining a high level of client satisfaction while meeting response time guidelines. · Resolving Client Support Incidents and effectively communicate status, solutions and/or workarounds to clients. · Properly documenting actions taken on all work for Client Support Incidents. · Other specific projects to be defined by R&D IS management as needed. TIMEFRAME* The contractor is required from July 1, 2010 through to December 31, 2010, with the possibility of extension to 2011, depending on budget availability, project portfolio needs, and performance. DELIVERABLES In addition to the project-specific deliverables described in the Scope of Work, the following deliverables may be required from the contractor for each project worked on: Project Plan A high-level project plan using Microsoft Project will be developed in the early stage of each project. The plan will list high level timelines and resource requirements. This plan will be further refined once the requirements document is complete. This plan will be reviewed and approved by a Sanofi Pasteur R&D IS representative. If the contractor is not the project lead then they will provide input to this document. Requirements Document A requirements document will be developed in our IS eDoc document management system. This document will be developed through requirements gathering meetings with the business user and through requirements review sessions with the IS technical team. This document will be approved through the IS eDoc workflow process. If the contractor is not the project lead then they will need to provide input to this document. Development If the contractor is a developer on the project he/she will develop or modify the code necessary to meet the requirements document. He/she will also unit test the code that has been developed or modified prior to delivering it to the project lead and business user for user acceptance testing. If the contractor is the project lead he/she will provide direction to the developers throughout this stage. Testing The contractor will oversee the testing of the changes to the system by developing test scripts with the help of the business users. These test scripts will trace back to each individual requirement in the requirements document. These test scripts will be developed in IS eDoc and reviewed and approved through the IS eDoc workflow process. Implementation The contractor will oversee moving of the changes to the system into production. He/she will ensure all necessary documentation is approved and closed out in IS eDoc and the EPM time management system. POSITION REQUIRED (ROLE) A Technical Support Analyst with Bioinformatics experience is required for this role. Technical expertise requirements include: · Experience with Windows and Linux/UNIX operating systems are essential (Mac OS X and Solaris will be an asset), and experience with distributed computing is required. · Proficiency with RDBMS-based (MySQL, Postgresql, Oracle) applications and database concepts. · Proficiency with UNIX text processing tools and shell scripting. · Proficiency with a major programming language (e.g. C/C+); scripting languages (e.g. Perl, Python) · Understanding of web server, networking and network protocols. · Solid understanding of the software development cycle, including testing methodologies and change management control, and experience out-sourcing and managing software development, · Demonstrated previous experience supporting bioinformatics tools and applications. Examples may include molecular modeling applications, sequence analysis packages, genomic data analysis tools and data integration applications. · Able to use Microsoft Office tools. Professional requirements include: · Resourceful problem solver with excellent interpersonal and communication skills, including the ability to express technical ideas clearly · Able to work effectively within a team environment. · Good written and verbal communication skills required to deliver high quality Client Support and reliable follow-up to clients. · Demonstrated ability to promptly handle problems, providing status updates, and documenting the problem and resolution. · Present technical & functional ideas clearly while checking for client understanding. · Experience in developing technical documentation. · Experience with software testing, including development of test plans and detailed test scripts based on requirements and design documentation. SKILLS REQUIRED * The candidates must possess the following skills/education: A Bachelor’s degree in Computer Science, Engineering or equivalent. Best, Kathleen McTeague Senior Staffing Consultant Randstad Life Science Staffing 617-354-7215 kathleen.mcteague(a)us.randstad.com<mailto:kathleen.mcteague@us.randstad.com>

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IBM ThinkPad T22 for sale; $50
by Tatsh July 26, 2010

July 26, 2010

Hard drive emptied. Has a license for Windows 2000 on the bottom. - 15" screen, has a line going through it near the top that sometimes visible, sometimes white, sometimes black; probably not repairable without a replacement - DVD-ROM drive working but funky with eject; swappable with floppy drive (included) - Battery completely drained - Comes with docking station (which has power button, ethernet, VGA, DVI, serial, 1xUSB, PS/2 ports for mouse and keyboard, audio out and mic in, and a port used by some PCMCIA cards I can't remember what it's called (small)) - Comes with AC Adapter - 2x128MB RAM; fully tested OK - Pentium III @ 700 MHz - Video card is an Intel variant of the time $50 sold. Call me at 978-870-5908 (Andy). Thanks -- Tatsh www.tatsh.net ddrtist(a)gmail.com

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Linux rebotics??
by Ken Jones July 20, 2010

July 20, 2010

Are you all aware of any robot clubs in eastern Massachusetts. I am interested in robots in general, but even more interested in Linux robotics. Are there any break through products you know about? I have not searched the web. This email is a spur of the moment action. Ken

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Re: [Wlug] Wlug Digest, Vol 81, Issue 7
by Caobin zhu July 10, 2010

July 10, 2010

Hi, I am interested in your thinkpad. can you give a little more detail about it? like what's the model number and screen size? is the battery still charging working/ does it come with a DVD-drive and/floppy? is the drive removable? how big is the hard disk size? and what is the cpu and memory size etc... thanks. > From: wlug-request(a)mail.wlug.org > Subject: Wlug Digest, Vol 81, Issue 7 > To: wlug(a)mail.wlug.org > Date: Sat, 10 Jul 2010 12:00:03 -0400 > > Send Wlug mailing list submissions to > wlug(a)mail.wlug.org > > To subscribe or unsubscribe via the World Wide Web, visit > http://mail.wlug.org/mailman/listinfo/wlug > or, via email, send a message with subject or body 'help' to > wlug-request(a)mail.wlug.org > > You can reach the person managing the list at > wlug-owner(a)mail.wlug.org > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Wlug digest..." > > > Today's Topics: > > 1. Classic car for sale (1963 Mercury Monterey 2 door), and a > ThinkPad! (Tatsh) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Fri, 9 Jul 2010 13:10:22 -0400 > From: Tatsh <ddrtist(a)gmail.com> > Subject: [Wlug] Classic car for sale (1963 Mercury Monterey 2 door), > and a ThinkPad! > To: wlug(a)mail.wlug.org > Message-ID: <201007091310.22714.ddrtist(a)gmail.com> > Content-Type: Text/Plain; charset="iso-8859-1" > > Hope this is appropriate. I prefer to do local sale only with cars so I > thought what the heck. > > Here are the details: > 1963 Mercury Monterey > Custom 2 Door Hardtop Breezeway > Here is a rare near-mint condition 2-door version of the 1963 Monterey. Barn > find! Engine compartment is very clean. This car frame and floor are solid. > The frame, floors and under carriage of this car are very clean. Car has been > primed white. Has installed 15" tires, and includes original 14" tires. > > Any questions? Just call 978-870-5908 (Andy) between 10 AM and 8 PM. > > Plenty of pictures here: > http://cgi.ebay.com/ebaymotors/ws/eBayISAPI.dll?ViewItem&item=280531424951 > > I'm 100% legit. My refs are on eBay. > > Also, what I might have for sale is an IBM ThinkPad (pre-Lenovo, came with > 2000 License). > -- > Andrew Udvare > 978-870-5908 > > > ------------------------------ > > _______________________________________________ > Wlug mailing list > Wlug(a)mail.wlug.org > http://mail.wlug.org/mailman/listinfo/wlug > > > End of Wlug Digest, Vol 81, Issue 7 > *********************************** _________________________________________________________________ Hotmail has tools for the New Busy. Search, chat and e-mail from your inbox. http://www.windowslive.com/campaign/thenewbusy?ocid=PID28326::T:WLMTAGL:ON:…

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PC to Home Stereo Solution
by Gary Hanley July 9, 2010

July 9, 2010

Is it me or is there no good solution to streaming your OGG and FLAC music files to your home stereo from Linux. Even the Windows solutions seem sparse and are usually proprietary. I have wanted to do this for a long time and every time I start googling for a solution I come up empty. Does anyone have any experience with this? I would appreciate your comments. Thanks, and Happy 4th! -- Gary

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Addonics Dual CF IDE adaptor for sale - 15.00
by Adam Keck July 7, 2010

July 7, 2010

Anyone interested in a Dual CF/IDE adaptor [1]? Unfortunately, I won't be able to do the project for which I bought it. I can bring it to the next meeting. Thanks, -Adam [1] http://www.addonics.com/products/flash_memory_reader/ad44midecf.asp

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Announce: WLUG Meeting Thursday July 8 7PM
by Chuck Anderson July 6, 2010

July 6, 2010

Hi folks, Our next WLUG meeting is scheduled to be held on Thursday, July 8 at 7:00 PM in Morgan Hall at the WPI campus in Worcester, MA USA. This is an informal open meeting. Anyone who is interested in a certain topic, feel free to come to the meeting and discuss it. There has been a lot of talk about streaming music to stereo systems, so I suggest we talk about that. We'll also discuss the WLUG BBQ which is on for August! We'll go out for pizza afterwards. The meeting room is in WPI's Morgan Hall (building 'H' on the campus map [1]), down the hallway to the right of the dining hall entrance. [1] http://www.wpi.edu/Images/CMS/WPI/walkingmap.pdf I look forward to seeing you there, Chuck President, Worcester Linux Users' Group

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LinuxCon 2010 in Boston, August 10-12
by Chuck Anderson June 28, 2010

June 28, 2010

Nichola Mente from The Linux Foundation asked me to post this event notification and discount code: Hello WLUG Members: LinuxCon 2010 will be held in Boston this Aug 10-12, and we would like to offer each of you a discount on registration fees as local community members. Information, schedule and registration can be found on our website: http://events.linuxfoundation.org/events/linuxcon When registering, please use this code to receive a 20% discount: LCB_UG20 Happy Monday! Nichola

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Grub and E-Waste
by ted June 26, 2010

June 26, 2010

Two somewhat related questions. I went to a USB keyboard after my PS keyboard broke. I am running Ubuntu 10.04. How do I get GRUB to recognize the keyboard? Second, where do I get rid of the broken keyboard? Does Worcester have an E-Waste recycling center? Thanks. Ted

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BBQ and My Keyboard
by ted June 26, 2010

June 26, 2010

> Chuck Anderson wrote: > > I neglected to bring up this topic at our last meeting. We usually > > have a WLUG summer BBQ around July or August, so I'd like to get the > > planning discussion going now. Are people interested in having a BBQ > > this year, and if so, would someone be willing to host it? WLUG > > should enough in the bank to fund the food (Andy can you confirm?), so > > all we need is a place with a BBQ grill and a time. > > > > Comments? Ideas? I love to BBQ. I don't have a good space for hosting, but can we use one of the many fine parks in Worcester? Thats the way we rolled in Joisey. As for my USB Keyboard, the BIOS had a switch to turn on USB Keyboards and the Mouse (though I never needed the mouse for grub). Thanks for the help! Ted

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